A group of young women in lab coats on McKeldin Mall

Arlin Stoltzfus
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Arlin Stoltzfus
Adjunct Professor
Research Biologist, National Institute of Standards and Technology

Research Interests

Computational data analysis and modeling of molecular evolution (mutation biases, constructive neutral evolution, introns, parallel evolution, etc); phyloinformatics; evolutionary theory.

All Publications

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Latest Publications via PubMed

Sun M,Stoltzfus A,McCandlish DM
A fitness distribution law for amino-acid replacements.
bioRxiv. 2024 Oct 15;:. pii: 2024.10.11.617952. doi: 10.1101/2024.10.11.617952. Epub 2024 Oct 15
Pillai AN,Toh KB,Perdomo D,Bhargava S,Stoltzfus A,Longini IM Jr,Pearson CAB,Hladish TJ
Agent-based modeling of the COVID-19 pandemic in Florida.
Epidemics. 2024 Jun;47:100774. doi: 10.1016/j.epidem.2024.100774. Epub 2024 May 17
Hladish TJ,Pillai AN,Pearson CAB,Toh KB,Tamayo AC,Stoltzfus A,Longini IM
Evaluating targeted COVID-19 vaccination strategies with agent-based modeling.
PLoS Comput Biol. 2024 May;20(5):e1012128. doi: 10.1371/journal.pcbi.1012128. Epub 2024 May 31
Gitschlag BL,Cano AV,Payne JL,McCandlish DM,Stoltzfus A
Mutation and Selection Induce Correlations between Selection Coefficients and Mutation Rates.
Am Nat. 2023 Oct;202(4):534-557. doi: 10.1086/726014. Epub 2023 Aug 25
Cano AV,Gitschlag BL,Rozhoňová H,Stoltzfus A,McCandlish DM,Payne JL
Mutation bias and the predictability of evolution.
Philos Trans R Soc Lond B Biol Sci. 2023 May 22;378(1877):20220055. doi: 10.1098/rstb.2022.0055. Epub 2023 Apr 3
Shea K,Borchering RK,Probert WJM,Howerton E,Bogich TL,Li SL,van Panhuis WG,Viboud C,Aguás R,Belov AA,Bhargava SH,Cavany SM,Chang JC,Chen C,Chen J,Chen S,Chen Y,Childs LM,Chow CC,Crooker I,Del Valle SY,España G,Fairchild G,Gerkin RC,Germann TC,Gu Q,Guan X,Guo L,Hart GR,Hladish TJ,Hupert N,Janies D,Kerr CC,Klein DJ,Klein EY,Lin G,Manore C,Meyers LA,Mittler JE,Mu K,Núñez RC,Oidtman RJ,Pasco R,Pastore Y Piontti A,Paul R,Pearson CAB,Perdomo DR,Perkins TA,Pierce K,Pillai AN,Rael RC,Rosenfeld K,Ross CW,Spencer JA,Stoltzfus AB,Toh KB,Vattikuti S,Vespignani A,Wang L,White LJ,Xu P,Yang Y,Yogurtcu ON,Zhang W,Zhao Y,Zou D,Ferrari MJ,Pannell D,Tildesley MJ,Seifarth J,Johnson E,Biggerstaff M,Johansson MA,Slayton RB,Levander JD,Stazer J,Kerr J,Runge MC
Multiple models for outbreak decision support in the face of uncertainty.
Proc Natl Acad Sci U S A. 2023 May 2;120(18):e2207537120. doi: 10.1073/pnas.2207537120. Epub 2023 Apr 25
Hladish TJ,Pillai AN,Pearson CAB,Toh KB,Tamayo A,Stoltzfus A,Longini IM Jr
Evaluating targeted COVID-19 vaccination strategies with agent-based modeling.
medRxiv. 2023 Mar 10;:. pii: 2023.03.09.23285319. doi: 10.1101/2023.03.09.23285319. Epub 2023 Mar 10
Cano AV,Rozhoňová H,Stoltzfus A,McCandlish DM,Payne JL
Mutation bias shapes the spectrum of adaptive substitutions.
Proc Natl Acad Sci U S A. 2022 Feb 15;119(7):. doi: 10.1073/pnas.2119720119. Epub
Shea K,Borchering RK,Probert WJM,Howerton E,Bogich TL,Li S,van Panhuis WG,Viboud C,Aguás R,Belov A,Bhargava SH,Cavany S,Chang JC,Chen C,Chen J,Chen S,Chen Y,Childs LM,Chow CC,Crooker I,Valle SYD,España G,Fairchild G,Gerkin RC,Germann TC,Gu Q,Guan X,Guo L,Hart GR,Hladish TJ,Hupert N,Janies D,Kerr CC,Klein DJ,Klein E,Lin G,Manore C,Meyers LA,Mittler J,Mu K,Núñez RC,Oidtman R,Pasco R,Piontti APY,Paul R,Pearson CAB,Perdomo DR,Perkins TA,Pierce K,Pillai AN,Rael RC,Rosenfeld K,Ross CW,Spencer JA,Stoltzfus AB,Toh KB,Vattikuti S,Vespignani A,Wang L,White L,Xu P,Yang Y,Yogurtcu ON,Zhang W,Zhao Y,Zou D,Ferrari M,Pannell D,Tildesley M,Seifarth J,Johnson E,Biggerstaff M,Johansson M,Slayton RB,Levander J,Stazer J,Salerno J,Runge MC
COVID-19 reopening strategies at the county level in the face of uncertainty: Multiple Models for Outbreak Decision Support.
medRxiv. 2020 Nov 5;:. pii: 2020.11.03.20225409. doi: 10.1101/2020.11.03.20225409. Epub 2020 Nov 5
Weissman JL,Stoltzfus A,Westra ER,Johnson PLF
Avoidance of Self during CRISPR Immunization.
Trends Microbiol. 2020 Jul;28(7):543-553. doi: 10.1016/j.tim.2020.02.005. Epub 2020 Apr 10
Nguyen VD,Nguyen TH,Tayeen ASM,Laughinghouse HD 4th,Sánchez-Reyes LL,Wiggins J,Pontelli E,Mozzherin D,O'Meara B,Stoltzfus A
Phylotastic: Improving Access to Tree-of-Life Knowledge With Flexible, on-the-Fly Delivery of Trees.
Evol Bioinform Online. 2020;16:1176934319899384. doi: 10.1177/1176934319899384. Epub 2020 Apr 6
Storz JF,Natarajan C,Signore AV,Witt CC,McCandlish DM,Stoltzfus A
The role of mutation bias in adaptive molecular evolution: insights from convergent changes in protein function.
Philos Trans R Soc Lond B Biol Sci. 2019 Jul 22;374(1777):20180238. doi: 10.1098/rstb.2018.0238. Epub 2019 Jun 3

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